Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 MIR574-201ENST00000385209 96 ntBASIC18.77■□□□□ 0.6
LRRC3Q9BY71 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.77■□□□□ 0.6
LRRC3Q9BY71 SCARNA2-201ENST00000458748 420 ntBASIC18.77■□□□□ 0.6
LRRC3Q9BY71 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.77■□□□□ 0.6
LRRC3Q9BY71 FAM215A-202ENST00000632077 792 ntBASIC18.77■□□□□ 0.6
LRRC3Q9BY71 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.77■□□□□ 0.6
LRRC3Q9BY71 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 AC126763.1-201ENST00000552015 2118 ntBASIC18.77■□□□□ 0.6
LRRC3Q9BY71 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
LRRC3Q9BY71 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC3Q9BY71 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 CROCCP3-202ENST00000420820 1947 ntBASIC18.76■□□□□ 0.59
LRRC3Q9BY71 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 SART3-203ENST00000546611 1184 ntBASIC18.76■□□□□ 0.59
LRRC3Q9BY71 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC3Q9BY71 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 AC021087.4-201ENST00000563761 564 ntBASIC18.75■□□□□ 0.59
LRRC3Q9BY71 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC3Q9BY71 AC097374.2-201ENST00000618617 1306 ntBASIC18.74■□□□□ 0.59
LRRC3Q9BY71 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 AC073648.2-201ENST00000510116 352 ntBASIC18.74■□□□□ 0.59
LRRC3Q9BY71 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC3Q9BY71 AC120498.9-201ENST00000339021 3867 ntBASIC18.74■□□□□ 0.59
LRRC3Q9BY71 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC3Q9BY71 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms