Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MIR4525-201ENST00000580000 75 ntBASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 AL158211.3-201ENST00000607385 239 ntBASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 AC092919.2-201ENST00000623631 1645 ntBASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 MIR149-201ENST00000384879 89 ntBASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 KRT18P32-201ENST00000424695 1287 ntBASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 AL592309.1-201ENST00000443127 649 ntBASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 KRT8P48-201ENST00000515599 1220 ntBASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 FAM8A2P-201ENST00000528813 1142 ntBASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 AC009118.2-201ENST00000613275 655 ntBASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 AL805961.1-202ENST00000641562 540 ntBASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.86■□□□□ 0.45
LRFN3Q9BTN0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 FAM58DP-201ENST00000428076 619 ntBASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 KRT18P65-201ENST00000439811 1286 ntBASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 AC097493.3-201ENST00000509725 367 ntBASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 AC068587.9-201ENST00000641814 219 ntBASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN3Q9BTN0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 AL020989.1-201ENST00000422979 469 ntBASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms