Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 AF186192.3-201ENST00000583427 947 ntBASIC17.57■□□□□ 0.4
EBF4Q9BQW3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 AC132938.6-201ENST00000623828 1655 ntBASIC17.57■□□□□ 0.4
EBF4Q9BQW3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 LINC00304-203ENST00000565008 1864 ntBASIC17.56■□□□□ 0.4
EBF4Q9BQW3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
EBF4Q9BQW3 HOXB1-202ENST00000577092 1414 ntBASIC17.55■□□□□ 0.4
EBF4Q9BQW3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 AC106886.4-201ENST00000623557 2502 ntBASIC17.55■□□□□ 0.4
EBF4Q9BQW3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 AC073195.1-201ENST00000607241 877 ntBASIC17.55■□□□□ 0.4
EBF4Q9BQW3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.55■□□□□ 0.4
EBF4Q9BQW3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
EBF4Q9BQW3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
EBF4Q9BQW3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
EBF4Q9BQW3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.54■□□□□ 0.4
EBF4Q9BQW3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms