Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
IFT140Q96RY7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
IFT140Q96RY7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC29.64■■■□□ 2.34
IFT140Q96RY7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC29.64■■■□□ 2.34
IFT140Q96RY7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.33
IFT140Q96RY7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC29.64■■■□□ 2.33
IFT140Q96RY7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
IFT140Q96RY7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
IFT140Q96RY7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
IFT140Q96RY7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC29.63■■■□□ 2.33
IFT140Q96RY7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC29.63■■■□□ 2.33
IFT140Q96RY7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
IFT140Q96RY7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
IFT140Q96RY7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
IFT140Q96RY7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
IFT140Q96RY7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
IFT140Q96RY7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC29.63■■■□□ 2.33
IFT140Q96RY7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
IFT140Q96RY7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
IFT140Q96RY7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC29.62■■■□□ 2.33
IFT140Q96RY7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
IFT140Q96RY7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
IFT140Q96RY7 DUX4L17-201ENST00000557360 1267 ntBASIC29.62■■■□□ 2.33
IFT140Q96RY7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC29.62■■■□□ 2.33
IFT140Q96RY7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC29.62■■■□□ 2.33
IFT140Q96RY7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
IFT140Q96RY7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
IFT140Q96RY7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
IFT140Q96RY7 AL049757.1-201ENST00000616842 1596 ntBASIC29.62■■■□□ 2.33
IFT140Q96RY7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
IFT140Q96RY7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
IFT140Q96RY7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC29.62■■■□□ 2.33
IFT140Q96RY7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC29.62■■■□□ 2.33
IFT140Q96RY7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
IFT140Q96RY7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
IFT140Q96RY7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
IFT140Q96RY7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 COX5BP2-201ENST00000392354 334 ntBASIC29.61■■■□□ 2.33
IFT140Q96RY7 HLA-V-201ENST00000429037 534 ntBASIC29.61■■■□□ 2.33
IFT140Q96RY7 FAM207CP-201ENST00000443486 507 ntBASIC29.61■■■□□ 2.33
IFT140Q96RY7 CNN2P2-201ENST00000443536 909 ntBASIC29.61■■■□□ 2.33
IFT140Q96RY7 CNN2P3-201ENST00000450201 906 ntBASIC29.61■■■□□ 2.33
IFT140Q96RY7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 AL136317.3-201ENST00000618497 906 ntBASIC29.61■■■□□ 2.33
IFT140Q96RY7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 AC006116.8-202ENST00000587620 1550 ntBASIC29.61■■■□□ 2.33
IFT140Q96RY7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
IFT140Q96RY7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
IFT140Q96RY7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
IFT140Q96RY7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
IFT140Q96RY7 PTCHD3P3-201ENST00000403073 906 ntBASIC29.61■■■□□ 2.33
IFT140Q96RY7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
IFT140Q96RY7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
IFT140Q96RY7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
IFT140Q96RY7 AC092919.2-201ENST00000623631 1645 ntBASIC29.6■■■□□ 2.33
IFT140Q96RY7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
IFT140Q96RY7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
IFT140Q96RY7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
IFT140Q96RY7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 UGT1A2P-201ENST00000454886 866 ntBASIC29.6■■■□□ 2.33
IFT140Q96RY7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
IFT140Q96RY7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
IFT140Q96RY7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
IFT140Q96RY7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
IFT140Q96RY7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
IFT140Q96RY7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC29.6■■■□□ 2.33
IFT140Q96RY7 FUT8-AS1-201ENST00000621019 1521 ntBASIC29.59■■■□□ 2.33
IFT140Q96RY7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC29.59■■■□□ 2.33
IFT140Q96RY7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
IFT140Q96RY7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
IFT140Q96RY7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
IFT140Q96RY7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC29.59■■■□□ 2.33
IFT140Q96RY7 INGX-202ENST00000489074 768 ntBASIC29.59■■■□□ 2.33
IFT140Q96RY7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
IFT140Q96RY7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
IFT140Q96RY7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
IFT140Q96RY7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC29.58■■■□□ 2.33
IFT140Q96RY7 TFAMP1-201ENST00000412727 736 ntBASIC29.58■■■□□ 2.33
IFT140Q96RY7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC29.58■■■□□ 2.33
IFT140Q96RY7 AC055876.3-201ENST00000431496 288 ntBASIC29.58■■■□□ 2.33
IFT140Q96RY7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC29.58■■■□□ 2.33
IFT140Q96RY7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC29.58■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms