Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4DQ92854 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SEMA4DQ92854 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.39■□□□□ 0.69
SEMA4DQ92854 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.39■□□□□ 0.69
SEMA4DQ92854 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4DQ92854 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4DQ92854 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4DQ92854 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.39■□□□□ 0.69
SEMA4DQ92854 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4DQ92854 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4DQ92854 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4DQ92854 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4DQ92854 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SEMA4DQ92854 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4DQ92854 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4DQ92854 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SEMA4DQ92854 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SEMA4DQ92854 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA4DQ92854 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA4DQ92854 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA4DQ92854 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA4DQ92854 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA4DQ92854 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA4DQ92854 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA4DQ92854 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 AC087388.1-201ENST00000571370 1112 ntBASIC19.38■□□□□ 0.69
SEMA4DQ92854 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 AC006116.8-202ENST00000587620 1550 ntBASIC19.38■□□□□ 0.69
SEMA4DQ92854 KRT8P47-201ENST00000604727 1398 ntBASIC19.38■□□□□ 0.69
SEMA4DQ92854 AL445228.2-201ENST00000605589 952 ntBASIC19.38■□□□□ 0.69
SEMA4DQ92854 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA4DQ92854 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SEMA4DQ92854 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA4DQ92854 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 AC068472.1-201ENST00000474589 881 ntBASIC19.37■□□□□ 0.69
SEMA4DQ92854 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 AC011498.5-201ENST00000592027 486 ntBASIC19.37■□□□□ 0.69
SEMA4DQ92854 AC010331.1-201ENST00000611423 582 ntBASIC19.37■□□□□ 0.69
SEMA4DQ92854 AC009154.2-201ENST00000621177 724 ntBASIC19.37■□□□□ 0.69
SEMA4DQ92854 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SEMA4DQ92854 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA4DQ92854 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.36■□□□□ 0.69
SEMA4DQ92854 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.36■□□□□ 0.69
SEMA4DQ92854 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.36■□□□□ 0.69
SEMA4DQ92854 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
SEMA4DQ92854 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.36■□□□□ 0.69
SEMA4DQ92854 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SEMA4DQ92854 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.36■□□□□ 0.69
SEMA4DQ92854 MIR1224-201ENST00000408193 85 ntBASIC19.36■□□□□ 0.69
SEMA4DQ92854 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.36■□□□□ 0.69
SEMA4DQ92854 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 TSPY22P-201ENST00000427496 604 ntBASIC19.36■□□□□ 0.69
SEMA4DQ92854 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.36■□□□□ 0.69
SEMA4DQ92854 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.36■□□□□ 0.69
SEMA4DQ92854 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA4DQ92854 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms