Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
RTF1Q92541 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTF1Q92541 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.47■■□□□ 1.35
RTF1Q92541 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTF1Q92541 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
RTF1Q92541 AC004408.2-201ENST00000623613 2777 ntBASIC23.46■■□□□ 1.35
RTF1Q92541 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RTF1Q92541 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTF1Q92541 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTF1Q92541 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.46■■□□□ 1.35
RTF1Q92541 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTF1Q92541 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.46■■□□□ 1.35
RTF1Q92541 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.46■■□□□ 1.35
RTF1Q92541 INTS4P1-201ENST00000438455 1935 ntBASIC23.46■■□□□ 1.35
RTF1Q92541 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.46■■□□□ 1.35
RTF1Q92541 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC23.46■■□□□ 1.35
RTF1Q92541 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC23.46■■□□□ 1.35
RTF1Q92541 AL096828.2-201ENST00000567259 1965 ntBASIC23.46■■□□□ 1.35
RTF1Q92541 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTF1Q92541 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.46■■□□□ 1.35
RTF1Q92541 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.46■■□□□ 1.35
RTF1Q92541 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTF1Q92541 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTF1Q92541 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTF1Q92541 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.45■■□□□ 1.35
RTF1Q92541 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.45■■□□□ 1.34
RTF1Q92541 AC138932.1-201ENST00000534164 6830 ntBASIC23.45■■□□□ 1.34
RTF1Q92541 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTF1Q92541 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTF1Q92541 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTF1Q92541 AC022898.2-201ENST00000616822 1312 ntBASIC23.45■■□□□ 1.34
RTF1Q92541 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTF1Q92541 AP002469.2-201ENST00000531724 424 ntBASIC23.45■■□□□ 1.34
RTF1Q92541 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.45■■□□□ 1.34
RTF1Q92541 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTF1Q92541 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.45■■□□□ 1.34
RTF1Q92541 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
RTF1Q92541 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTF1Q92541 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTF1Q92541 AC093677.2-201ENST00000600169 1863 ntBASIC23.45■■□□□ 1.34
RTF1Q92541 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.34
RTF1Q92541 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTF1Q92541 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTF1Q92541 BCL2-203ENST00000589955 5011 ntBASIC23.44■■□□□ 1.34
RTF1Q92541 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.44■■□□□ 1.34
RTF1Q92541 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTF1Q92541 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTF1Q92541 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTF1Q92541 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTF1Q92541 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTF1Q92541 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.44■■□□□ 1.34
RTF1Q92541 DUTP2-201ENST00000519164 463 ntBASIC23.44■■□□□ 1.34
RTF1Q92541 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.44■■□□□ 1.34
RTF1Q92541 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTF1Q92541 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.44■■□□□ 1.34
RTF1Q92541 GZMM-202ENST00000592501 941 ntTSL 3 BASIC23.44■■□□□ 1.34
RTF1Q92541 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.44■■□□□ 1.34
RTF1Q92541 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RTF1Q92541 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTF1Q92541 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTF1Q92541 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.43■■□□□ 1.34
RTF1Q92541 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC23.43■■□□□ 1.34
RTF1Q92541 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC23.43■■□□□ 1.34
RTF1Q92541 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.43■■□□□ 1.34
RTF1Q92541 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.43■■□□□ 1.34
RTF1Q92541 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.43■■□□□ 1.34
RTF1Q92541 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.43■■□□□ 1.34
RTF1Q92541 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.43■■□□□ 1.34
RTF1Q92541 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
RTF1Q92541 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.43■■□□□ 1.34
RTF1Q92541 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.43■■□□□ 1.34
RTF1Q92541 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC23.43■■□□□ 1.34
RTF1Q92541 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.43■■□□□ 1.34
RTF1Q92541 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC23.43■■□□□ 1.34
RTF1Q92541 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 AC135776.1-201ENST00000319817 2481 ntBASIC23.43■■□□□ 1.34
RTF1Q92541 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC23.43■■□□□ 1.34
RTF1Q92541 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.43■■□□□ 1.34
RTF1Q92541 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.43■■□□□ 1.34
RTF1Q92541 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
RTF1Q92541 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC23.43■■□□□ 1.34
RTF1Q92541 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTF1Q92541 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTF1Q92541 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
RTF1Q92541 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms