Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 AC034232.1-201ENST00000506026 1064 ntBASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 AC133561.5-201ENST00000635547 218 ntBASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 PCDHB18P-201ENST00000524813 2368 ntBASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP1Q8TDR0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 AC140113.3-201ENST00000605663 199 ntBASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 AC073912.3-201ENST00000624414 853 ntBASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 AL157888.1-201ENST00000631930 593 ntBASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 GNAS-203ENST00000306120 1878 ntBASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAF3IP1Q8TDR0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 AC134043.2-201ENST00000624206 2238 ntBASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRAF3IP1Q8TDR0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 GCSHP2-201ENST00000560971 527 ntBASIC18.79■□□□□ 0.6
TRAF3IP1Q8TDR0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms