Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 AC105020.1-201ENST00000435356 2205 ntBASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 POM121L13P-201ENST00000422362 380 ntBASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 NCF1B-203ENST00000435988 1254 ntBASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 AC091390.4-202ENST00000476426 537 ntBASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 MIR4758-201ENST00000577688 71 ntBASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 PCDHA14-201ENST00000506751 2298 ntBASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH3Q8TBE1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 GUSBP6-202ENST00000438529 1198 ntBASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 TSPY6P-201ENST00000448518 926 ntBASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 AGGF1P2-201ENST00000426656 2106 ntBASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.49■□□□□ 0.23
CNIH3Q8TBE1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 UNC93B4-201ENST00000505679 747 ntBASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 AC131212.4-201ENST00000623606 975 ntBASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms