Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 AC019129.2-201ENST00000609837 1235 ntBASIC25.46■■□□□ 1.67
UBR1Q8IWV7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC25.45■■□□□ 1.67
UBR1Q8IWV7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.67
UBR1Q8IWV7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
UBR1Q8IWV7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.45■■□□□ 1.66
UBR1Q8IWV7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 ACTG1P14-201ENST00000446382 1122 ntBASIC25.44■■□□□ 1.66
UBR1Q8IWV7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
UBR1Q8IWV7 ANO7L1-203ENST00000602586 1720 ntBASIC25.44■■□□□ 1.66
UBR1Q8IWV7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 BCAR1-209ENST00000546196 1340 ntBASIC25.43■■□□□ 1.66
UBR1Q8IWV7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 ESPNP-201ENST00000270691 2015 ntBASIC25.43■■□□□ 1.66
UBR1Q8IWV7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 PAWRP1-201ENST00000451083 565 ntBASIC25.43■■□□□ 1.66
UBR1Q8IWV7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC25.43■■□□□ 1.66
UBR1Q8IWV7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 AC009093.7-201ENST00000623853 1223 ntBASIC25.42■■□□□ 1.66
UBR1Q8IWV7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UBR1Q8IWV7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
UBR1Q8IWV7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms