Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC62Q6P9F0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 AC243591.1-201ENST00000452967 1364 ntBASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 CROCCP3-202ENST00000420820 1947 ntBASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 AL049840.3-201ENST00000602669 611 ntBASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC62Q6P9F0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 SLC25A1P1-201ENST00000528351 927 ntBASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 AC023511.2-201ENST00000618803 211 ntBASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC62Q6P9F0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.2■□□□□ 0.83
CCDC62Q6P9F0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 SCARNA2-201ENST00000458748 420 ntBASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 MIR7706-201ENST00000613747 67 ntBASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 FAM215A-202ENST00000632077 792 ntBASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC62Q6P9F0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms