Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 AC004951.3-201ENST00000418645 1148 ntBASIC17.41■□□□□ 0.38
RNF220Q5VTB9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 AF186192.3-201ENST00000583427 947 ntBASIC17.41■□□□□ 0.38
RNF220Q5VTB9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 AL359736.2-201ENST00000621992 437 ntBASIC17.41■□□□□ 0.38
RNF220Q5VTB9 AL031985.4-201ENST00000642138 673 ntBASIC17.41■□□□□ 0.38
RNF220Q5VTB9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF220Q5VTB9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.4■□□□□ 0.38
RNF220Q5VTB9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 AC091390.4-202ENST00000476426 537 ntBASIC17.4■□□□□ 0.38
RNF220Q5VTB9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 AC073195.1-201ENST00000607241 877 ntBASIC17.4■□□□□ 0.38
RNF220Q5VTB9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF220Q5VTB9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF220Q5VTB9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF220Q5VTB9 AL121761.2-201ENST00000598007 1648 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms