Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 AC008687.5-201ENST00000593746 558 ntBASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 AP000525.1-201ENST00000608286 694 ntBASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 LINC00304-203ENST00000565008 1864 ntBASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 AP001094.4-201ENST00000579008 2176 ntBASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRIF1Q5T3J3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 PCDHA12-202ENST00000613593 2588 ntBASIC17■□□□□ 0.31
LRIF1Q5T3J3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 TSPY14P-201ENST00000303979 915 ntBASIC17■□□□□ 0.31
LRIF1Q5T3J3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRIF1Q5T3J3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17■□□□□ 0.31
LRIF1Q5T3J3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 AL390955.1-201ENST00000428694 934 ntBASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 C2orf69P3-201ENST00000565542 1120 ntBASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.99■□□□□ 0.31
LRIF1Q5T3J3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LRIF1Q5T3J3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LRIF1Q5T3J3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRIF1Q5T3J3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.98■□□□□ 0.31
LRIF1Q5T3J3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRIF1Q5T3J3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRIF1Q5T3J3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms