Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLDN6P56747 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN6P56747 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN6P56747 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN6P56747 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN6P56747 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN6P56747 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN6P56747 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN6P56747 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN6P56747 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN6P56747 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN6P56747 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN6P56747 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN6P56747 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN6P56747 DNAJB3-202ENST00000449667 1266 ntBASIC17.27■□□□□ 0.36
CLDN6P56747 BX005266.1-201ENST00000473402 457 ntBASIC17.27■□□□□ 0.36
CLDN6P56747 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN6P56747 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN6P56747 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN6P56747 AC105339.3-201ENST00000560043 636 ntBASIC17.27■□□□□ 0.36
CLDN6P56747 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
CLDN6P56747 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN6P56747 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN6P56747 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CLDN6P56747 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CLDN6P56747 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN6P56747 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN6P56747 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN6P56747 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
CLDN6P56747 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
CLDN6P56747 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN6P56747 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CLDN6P56747 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.27■□□□□ 0.35
CLDN6P56747 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN6P56747 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN6P56747 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLDN6P56747 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
CLDN6P56747 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLDN6P56747 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN6P56747 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN6P56747 AC040169.1-201ENST00000565382 521 ntBASIC17.26■□□□□ 0.35
CLDN6P56747 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN6P56747 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN6P56747 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN6P56747 AL596442.2-201ENST00000610240 980 ntBASIC17.26■□□□□ 0.35
CLDN6P56747 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN6P56747 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN6P56747 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN6P56747 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN6P56747 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN6P56747 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN6P56747 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CLDN6P56747 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN6P56747 AC004817.3-201ENST00000602957 2129 ntBASIC17.26■□□□□ 0.35
CLDN6P56747 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 AC005332.7-201ENST00000614046 2005 ntBASIC17.25■□□□□ 0.35
CLDN6P56747 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN6P56747 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN6P56747 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN6P56747 RNA5SP416-201ENST00000516838 111 ntBASIC17.25■□□□□ 0.35
CLDN6P56747 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLDN6P56747 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN6P56747 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.25■□□□□ 0.35
CLDN6P56747 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN6P56747 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 AC018445.3-201ENST00000624177 1945 ntBASIC17.25■□□□□ 0.35
CLDN6P56747 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN6P56747 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLDN6P56747 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms