Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.8■□□□□ 0.76
ACLYP53396 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ACLYP53396 AL589182.2-201ENST00000619332 1049 ntBASIC19.8■□□□□ 0.76
ACLYP53396 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.8■□□□□ 0.76
ACLYP53396 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
ACLYP53396 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.8■□□□□ 0.76
ACLYP53396 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACLYP53396 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ACLYP53396 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ACLYP53396 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACLYP53396 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACLYP53396 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACLYP53396 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACLYP53396 GMCL1P1-201ENST00000463439 1581 ntBASIC19.79■□□□□ 0.76
ACLYP53396 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ACLYP53396 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ACLYP53396 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.79■□□□□ 0.76
ACLYP53396 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.79■□□□□ 0.76
ACLYP53396 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.79■□□□□ 0.76
ACLYP53396 SNHG9-202ENST00000564014 471 ntBASIC19.79■□□□□ 0.76
ACLYP53396 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ACLYP53396 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.79■□□□□ 0.76
ACLYP53396 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.79■□□□□ 0.76
ACLYP53396 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACLYP53396 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ACLYP53396 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.78■□□□□ 0.76
ACLYP53396 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
ACLYP53396 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.78■□□□□ 0.76
ACLYP53396 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.78■□□□□ 0.76
ACLYP53396 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.78■□□□□ 0.76
ACLYP53396 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ACLYP53396 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.78■□□□□ 0.76
ACLYP53396 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.78■□□□□ 0.76
ACLYP53396 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.78■□□□□ 0.76
ACLYP53396 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.78■□□□□ 0.76
ACLYP53396 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.78■□□□□ 0.76
ACLYP53396 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
ACLYP53396 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.78■□□□□ 0.76
ACLYP53396 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.78■□□□□ 0.76
ACLYP53396 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
ACLYP53396 MIR4469-201ENST00000583919 79 ntBASIC19.78■□□□□ 0.76
ACLYP53396 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ACLYP53396 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 AC002310.6-201ENST00000624451 1377 ntBASIC19.78■□□□□ 0.76
ACLYP53396 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.78■□□□□ 0.76
ACLYP53396 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 AC005332.7-201ENST00000614046 2005 ntBASIC19.78■□□□□ 0.76
ACLYP53396 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACLYP53396 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.77■□□□□ 0.76
ACLYP53396 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
ACLYP53396 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.77■□□□□ 0.76
ACLYP53396 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ACLYP53396 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ACLYP53396 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ACLYP53396 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.77■□□□□ 0.76
ACLYP53396 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ACLYP53396 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ACLYP53396 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.77■□□□□ 0.76
ACLYP53396 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.77■□□□□ 0.76
ACLYP53396 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ACLYP53396 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
ACLYP53396 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ACLYP53396 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.77■□□□□ 0.76
ACLYP53396 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.77■□□□□ 0.76
ACLYP53396 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.77■□□□□ 0.76
ACLYP53396 ALG1L5P-201ENST00000482043 771 ntBASIC19.77■□□□□ 0.76
ACLYP53396 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.77■□□□□ 0.76
ACLYP53396 AC092865.6-201ENST00000642101 219 ntBASIC19.77■□□□□ 0.76
ACLYP53396 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ACLYP53396 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ACLYP53396 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ACLYP53396 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ACLYP53396 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
ACLYP53396 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ACLYP53396 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ACLYP53396 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ACLYP53396 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ACLYP53396 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.76■□□□□ 0.75
ACLYP53396 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.76■□□□□ 0.75
ACLYP53396 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ACLYP53396 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ACLYP53396 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ACLYP53396 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ACLYP53396 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ACLYP53396 CRYGEP-201ENST00000412192 528 ntBASIC19.76■□□□□ 0.75
ACLYP53396 AC103564.2-201ENST00000432853 1299 ntBASIC19.76■□□□□ 0.75
ACLYP53396 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.76■□□□□ 0.75
ACLYP53396 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ACLYP53396 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.76■□□□□ 0.75
ACLYP53396 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.76■□□□□ 0.75
ACLYP53396 AC004706.3-202ENST00000621574 984 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms