Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.86■□□□□ 0.77
RFC5P40937 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.86■□□□□ 0.77
RFC5P40937 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 TP73-AS1-210ENST00000637775 1455 ntBASIC19.86■□□□□ 0.77
RFC5P40937 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC5P40937 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.85■□□□□ 0.77
RFC5P40937 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RFC5P40937 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.85■□□□□ 0.77
RFC5P40937 RN7SL510P-201ENST00000581311 263 ntBASIC19.85■□□□□ 0.77
RFC5P40937 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.85■□□□□ 0.77
RFC5P40937 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RFC5P40937 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RFC5P40937 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC5P40937 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.85■□□□□ 0.77
RFC5P40937 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RFC5P40937 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RFC5P40937 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.85■□□□□ 0.77
RFC5P40937 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC5P40937 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.85■□□□□ 0.77
RFC5P40937 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC5P40937 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.84■□□□□ 0.77
RFC5P40937 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.84■□□□□ 0.77
RFC5P40937 AC097374.2-201ENST00000618617 1306 ntBASIC19.84■□□□□ 0.77
RFC5P40937 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.84■□□□□ 0.77
RFC5P40937 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.84■□□□□ 0.77
RFC5P40937 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.84■□□□□ 0.77
RFC5P40937 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RFC5P40937 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RFC5P40937 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.84■□□□□ 0.77
RFC5P40937 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC5P40937 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.84■□□□□ 0.77
RFC5P40937 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFC5P40937 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.83■□□□□ 0.77
RFC5P40937 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
RFC5P40937 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.83■□□□□ 0.77
RFC5P40937 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFC5P40937 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RFC5P40937 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RFC5P40937 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC5P40937 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC5P40937 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC5P40937 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC5P40937 AC004870.1-201ENST00000315132 882 ntBASIC19.83■□□□□ 0.77
RFC5P40937 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFC5P40937 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFC5P40937 FAAHP1-202ENST00000446499 1238 ntBASIC19.83■□□□□ 0.77
RFC5P40937 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.83■□□□□ 0.77
RFC5P40937 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.83■□□□□ 0.77
RFC5P40937 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.83■□□□□ 0.77
RFC5P40937 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.83■□□□□ 0.77
RFC5P40937 MIR5100-201ENST00000579544 119 ntBASIC19.83■□□□□ 0.77
RFC5P40937 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC5P40937 AC011467.2-201ENST00000598425 242 ntBASIC19.83■□□□□ 0.77
RFC5P40937 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC5P40937 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFC5P40937 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFC5P40937 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFC5P40937 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.83■□□□□ 0.76
RFC5P40937 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RFC5P40937 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms