Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.75■□□□□ 0.43
VARSP26640 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 AC008894.3-201ENST00000624324 3103 ntBASIC17.75■□□□□ 0.43
VARSP26640 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VARSP26640 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.75■□□□□ 0.43
VARSP26640 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VARSP26640 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.74■□□□□ 0.43
VARSP26640 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VARSP26640 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.74■□□□□ 0.43
VARSP26640 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 SEC1P-202ENST00000473944 940 ntBASIC17.74■□□□□ 0.43
VARSP26640 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.74■□□□□ 0.43
VARSP26640 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VARSP26640 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.74■□□□□ 0.43
VARSP26640 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.74■□□□□ 0.43
VARSP26640 KRT126P-201ENST00000549467 1181 ntBASIC17.74■□□□□ 0.43
VARSP26640 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.74■□□□□ 0.43
VARSP26640 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.74■□□□□ 0.43
VARSP26640 AL121956.5-201ENST00000625261 221 ntBASIC17.74■□□□□ 0.43
VARSP26640 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.74■□□□□ 0.43
VARSP26640 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARSP26640 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.74■□□□□ 0.43
VARSP26640 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
VARSP26640 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARSP26640 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.73■□□□□ 0.43
VARSP26640 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARSP26640 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.73■□□□□ 0.43
VARSP26640 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
VARSP26640 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.73■□□□□ 0.43
VARSP26640 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARSP26640 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VARSP26640 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARSP26640 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARSP26640 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARSP26640 MIR149-201ENST00000384879 89 ntBASIC17.73■□□□□ 0.43
VARSP26640 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARSP26640 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.73■□□□□ 0.43
VARSP26640 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VARSP26640 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.73■□□□□ 0.43
VARSP26640 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.73■□□□□ 0.43
VARSP26640 KRT18P56-201ENST00000507275 550 ntBASIC17.73■□□□□ 0.43
VARSP26640 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.73■□□□□ 0.43
VARSP26640 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARSP26640 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.73■□□□□ 0.43
VARSP26640 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.73■□□□□ 0.43
VARSP26640 NEK4P2-201ENST00000580004 1012 ntBASIC17.73■□□□□ 0.43
VARSP26640 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.73■□□□□ 0.43
VARSP26640 AC010240.3-201ENST00000607688 395 ntBASIC17.73■□□□□ 0.43
VARSP26640 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.73■□□□□ 0.43
VARSP26640 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.73■□□□□ 0.43
VARSP26640 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARSP26640 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
VARSP26640 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.73■□□□□ 0.43
VARSP26640 AC009102.3-201ENST00000623118 1491 ntBASIC17.73■□□□□ 0.43
VARSP26640 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.73■□□□□ 0.43
VARSP26640 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.73■□□□□ 0.43
VARSP26640 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARSP26640 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VARSP26640 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
VARSP26640 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VARSP26640 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VARSP26640 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VARSP26640 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VARSP26640 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VARSP26640 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARSP26640 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.72■□□□□ 0.43
VARSP26640 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VARSP26640 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms