Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 AL121761.2-201ENST00000598007 1648 ntBASIC11.17□□□□□ -0.62
APOBP04114 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
APOBP04114 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.17□□□□□ -0.62
APOBP04114 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.17□□□□□ -0.62
APOBP04114 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.17□□□□□ -0.62
APOBP04114 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
APOBP04114 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.17□□□□□ -0.62
APOBP04114 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
APOBP04114 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.17□□□□□ -0.62
APOBP04114 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.17□□□□□ -0.62
APOBP04114 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.17□□□□□ -0.62
APOBP04114 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
APOBP04114 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
APOBP04114 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 ME2-218ENST00000640965 2476 ntTSL 5 BASIC11.17□□□□□ -0.62
APOBP04114 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
APOBP04114 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.17□□□□□ -0.62
APOBP04114 AC096734.2-201ENST00000562054 433 ntBASIC11.17□□□□□ -0.62
APOBP04114 AC099522.2-201ENST00000607001 744 ntBASIC11.17□□□□□ -0.62
APOBP04114 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
APOBP04114 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOBP04114 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
APOBP04114 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC11.16□□□□□ -0.62
APOBP04114 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
APOBP04114 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
APOBP04114 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.16□□□□□ -0.62
APOBP04114 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
APOBP04114 ADM-208ENST00000534464 1640 ntTSL 2 BASIC11.16□□□□□ -0.62
APOBP04114 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
APOBP04114 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
APOBP04114 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
APOBP04114 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
APOBP04114 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.16□□□□□ -0.62
APOBP04114 AC004461.1-201ENST00000412461 403 ntBASIC11.16□□□□□ -0.62
APOBP04114 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.16□□□□□ -0.62
APOBP04114 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.16□□□□□ -0.62
APOBP04114 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
APOBP04114 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC11.16□□□□□ -0.62
APOBP04114 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.16□□□□□ -0.62
APOBP04114 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.16□□□□□ -0.62
APOBP04114 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 AC010654.1-201ENST00000615722 808 ntBASIC11.16□□□□□ -0.62
APOBP04114 AC008761.3-201ENST00000624803 892 ntBASIC11.16□□□□□ -0.62
APOBP04114 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.16□□□□□ -0.62
APOBP04114 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.16□□□□□ -0.62
APOBP04114 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.16□□□□□ -0.62
APOBP04114 DUX4L17-201ENST00000557360 1267 ntBASIC11.16□□□□□ -0.62
APOBP04114 AC008687.5-201ENST00000593746 558 ntBASIC11.16□□□□□ -0.62
APOBP04114 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.16□□□□□ -0.62
APOBP04114 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
APOBP04114 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
APOBP04114 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
APOBP04114 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.15□□□□□ -0.62
APOBP04114 AL032819.2-201ENST00000624543 2162 ntBASIC11.15□□□□□ -0.62
APOBP04114 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
APOBP04114 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
APOBP04114 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.15□□□□□ -0.62
APOBP04114 AL020989.1-201ENST00000422979 469 ntBASIC11.15□□□□□ -0.62
APOBP04114 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.15□□□□□ -0.62
APOBP04114 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.15□□□□□ -0.62
APOBP04114 AP000344.2-201ENST00000512987 629 ntBASIC11.15□□□□□ -0.62
APOBP04114 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.15□□□□□ -0.62
APOBP04114 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
APOBP04114 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.15□□□□□ -0.62
APOBP04114 NCF1C-201ENST00000438382 1427 ntBASIC11.15□□□□□ -0.62
APOBP04114 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
APOBP04114 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms