Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV12-3P01733 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV12-3P01733 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
TRBV12-3P01733 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV12-3P01733 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV12-3P01733 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV12-3P01733 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV12-3P01733 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV12-3P01733 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV12-3P01733 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV12-3P01733 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV12-3P01733 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV12-3P01733 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV12-3P01733 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV12-3P01733 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 AC138028.4-201ENST00000564984 1845 ntBASIC13.93□□□□□ -0.18
TRBV12-3P01733 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 TSPY12P-201ENST00000421279 868 ntBASIC13.93□□□□□ -0.18
TRBV12-3P01733 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 AC091076.1-201ENST00000610741 619 ntBASIC13.93□□□□□ -0.18
TRBV12-3P01733 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV12-3P01733 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV12-3P01733 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRBV12-3P01733 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms