Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.4■□□□□ 0.7
TIMP1P01033 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.4■□□□□ 0.7
TIMP1P01033 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMP1P01033 PDPK2P-202ENST00000562415 1191 ntBASIC19.4■□□□□ 0.7
TIMP1P01033 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TIMP1P01033 AL096865.1-201ENST00000606796 927 ntBASIC19.4■□□□□ 0.7
TIMP1P01033 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMP1P01033 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TIMP1P01033 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TIMP1P01033 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP1P01033 IGLL3P-201ENST00000412472 434 ntBASIC19.39■□□□□ 0.69
TIMP1P01033 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
TIMP1P01033 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.39■□□□□ 0.69
TIMP1P01033 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.39■□□□□ 0.69
TIMP1P01033 AP000344.2-201ENST00000512987 629 ntBASIC19.39■□□□□ 0.69
TIMP1P01033 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP1P01033 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TIMP1P01033 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.39■□□□□ 0.69
TIMP1P01033 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.39■□□□□ 0.69
TIMP1P01033 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP1P01033 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP1P01033 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.39■□□□□ 0.69
TIMP1P01033 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP1P01033 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP1P01033 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.39■□□□□ 0.69
TIMP1P01033 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.39■□□□□ 0.69
TIMP1P01033 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP1P01033 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP1P01033 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TIMP1P01033 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.39■□□□□ 0.69
TIMP1P01033 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TIMP1P01033 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP1P01033 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
TIMP1P01033 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TIMP1P01033 AL139400.1-201ENST00000366220 510 ntBASIC19.38■□□□□ 0.69
TIMP1P01033 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.38■□□□□ 0.69
TIMP1P01033 COX5BP2-201ENST00000392354 334 ntBASIC19.38■□□□□ 0.69
TIMP1P01033 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP1P01033 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
TIMP1P01033 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP1P01033 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.38■□□□□ 0.69
TIMP1P01033 BCRP1-201ENST00000444246 691 ntBASIC19.38■□□□□ 0.69
TIMP1P01033 ACTG1P14-201ENST00000446382 1122 ntBASIC19.38■□□□□ 0.69
TIMP1P01033 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP1P01033 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP1P01033 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TIMP1P01033 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.38■□□□□ 0.69
TIMP1P01033 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TIMP1P01033 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TIMP1P01033 AC007952.6-201ENST00000573168 2673 ntBASIC19.38■□□□□ 0.69
TIMP1P01033 AIRN-201ENST00000601203 4374 ntBASIC19.38■□□□□ 0.69
TIMP1P01033 AC004877.2-201ENST00000623941 599 ntBASIC19.38■□□□□ 0.69
TIMP1P01033 AC003957.1-201ENST00000625108 2673 ntBASIC19.38■□□□□ 0.69
TIMP1P01033 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TIMP1P01033 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TIMP1P01033 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
TIMP1P01033 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TIMP1P01033 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TIMP1P01033 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.37■□□□□ 0.69
TIMP1P01033 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.37■□□□□ 0.69
TIMP1P01033 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.37■□□□□ 0.69
TIMP1P01033 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.37■□□□□ 0.69
TIMP1P01033 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.37■□□□□ 0.69
TIMP1P01033 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.37■□□□□ 0.69
TIMP1P01033 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.37■□□□□ 0.69
TIMP1P01033 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.37■□□□□ 0.69
TIMP1P01033 AC010654.1-201ENST00000615722 808 ntBASIC19.37■□□□□ 0.69
TIMP1P01033 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TIMP1P01033 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMP1P01033 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP1P01033 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.36■□□□□ 0.69
TIMP1P01033 AL353593.2-201ENST00000602529 1483 ntBASIC19.36■□□□□ 0.69
TIMP1P01033 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP1P01033 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP1P01033 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP1P01033 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TIMP1P01033 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TIMP1P01033 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms