Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC30.63■■■□□ 2.49
CUX2O14529 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CUX2O14529 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CUX2O14529 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
CUX2O14529 AL163051.1-201ENST00000569214 1512 ntBASIC30.63■■■□□ 2.49
CUX2O14529 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
CUX2O14529 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CUX2O14529 PARP8-206ENST00000503665 572 ntTSL 4 BASIC30.63■■■□□ 2.49
CUX2O14529 SLC25A39P2-201ENST00000537614 270 ntBASIC30.63■■■□□ 2.49
CUX2O14529 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CUX2O14529 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CUX2O14529 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC30.62■■■□□ 2.49
CUX2O14529 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CUX2O14529 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CUX2O14529 CU639417.3-201ENST00000624240 1404 ntBASIC30.62■■■□□ 2.49
CUX2O14529 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CUX2O14529 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CUX2O14529 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC30.62■■■□□ 2.49
CUX2O14529 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC30.62■■■□□ 2.49
CUX2O14529 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC30.62■■■□□ 2.49
CUX2O14529 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC30.62■■■□□ 2.49
CUX2O14529 COQ9-214ENST00000567933 882 ntTSL 3 BASIC30.62■■■□□ 2.49
CUX2O14529 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CUX2O14529 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
CUX2O14529 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
CUX2O14529 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CUX2O14529 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CUX2O14529 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CUX2O14529 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CUX2O14529 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CUX2O14529 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CUX2O14529 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC30.61■■■□□ 2.49
CUX2O14529 SPDYE21P-201ENST00000413323 827 ntBASIC30.61■■■□□ 2.49
CUX2O14529 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CUX2O14529 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC30.61■■■□□ 2.49
CUX2O14529 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CUX2O14529 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC30.61■■■□□ 2.49
CUX2O14529 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC30.61■■■□□ 2.49
CUX2O14529 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CUX2O14529 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CUX2O14529 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CUX2O14529 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CUX2O14529 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CUX2O14529 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
CUX2O14529 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC30.6■■■□□ 2.49
CUX2O14529 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC30.6■■■□□ 2.49
CUX2O14529 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC30.6■■■□□ 2.49
CUX2O14529 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CUX2O14529 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC30.6■■■□□ 2.49
CUX2O14529 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC30.6■■■□□ 2.49
CUX2O14529 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC30.6■■■□□ 2.49
CUX2O14529 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC30.6■■■□□ 2.49
CUX2O14529 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC30.6■■■□□ 2.49
CUX2O14529 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC30.6■■■□□ 2.49
CUX2O14529 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CUX2O14529 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CUX2O14529 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CUX2O14529 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CUX2O14529 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
CUX2O14529 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
CUX2O14529 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CUX2O14529 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CUX2O14529 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC30.59■■■□□ 2.49
CUX2O14529 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC30.59■■■□□ 2.49
CUX2O14529 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC30.59■■■□□ 2.49
CUX2O14529 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CUX2O14529 AC025580.3-201ENST00000617932 1424 ntBASIC30.59■■■□□ 2.49
CUX2O14529 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CUX2O14529 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CUX2O14529 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CUX2O14529 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CUX2O14529 WRB-204ENST00000398753 699 ntTSL 3 BASIC30.58■■■□□ 2.49
CUX2O14529 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CUX2O14529 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC30.58■■■□□ 2.49
CUX2O14529 GALT-202ENST00000450095 1280 ntTSL 2 BASIC30.58■■■□□ 2.49
CUX2O14529 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
CUX2O14529 KRT17P7-201ENST00000451704 1104 ntBASIC30.58■■■□□ 2.49
CUX2O14529 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC30.58■■■□□ 2.49
CUX2O14529 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC30.58■■■□□ 2.49
CUX2O14529 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
CUX2O14529 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC30.58■■■□□ 2.49
CUX2O14529 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
CUX2O14529 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CUX2O14529 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
CUX2O14529 UROS-202ENST00000368778 1556 ntTSL 2 BASIC30.58■■■□□ 2.49
CUX2O14529 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC30.58■■■□□ 2.49
CUX2O14529 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CUX2O14529 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
CUX2O14529 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC30.57■■■□□ 2.49
CUX2O14529 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC30.57■■■□□ 2.48
CUX2O14529 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC30.57■■■□□ 2.48
CUX2O14529 AC107890.1-201ENST00000422478 521 ntBASIC30.57■■■□□ 2.48
CUX2O14529 RPS2P32-201ENST00000439199 892 ntBASIC30.57■■■□□ 2.48
CUX2O14529 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC30.57■■■□□ 2.48
CUX2O14529 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC30.57■■■□□ 2.48
CUX2O14529 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC30.57■■■□□ 2.48
CUX2O14529 HILS1-202ENST00000545329 423 ntBASIC30.57■■■□□ 2.48
CUX2O14529 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
CUX2O14529 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC30.57■■■□□ 2.48
CUX2O14529 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms