Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.23■□□□□ 0.67
O00370 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.23■□□□□ 0.67
O00370 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
O00370 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.23■□□□□ 0.67
O00370 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.23■□□□□ 0.67
O00370 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.23■□□□□ 0.67
O00370 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.23■□□□□ 0.67
O00370 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
O00370 AL390719.2-201ENST00000606993 987 ntBASIC19.23■□□□□ 0.67
O00370 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
O00370 AC004263.2-201ENST00000617183 678 ntBASIC19.23■□□□□ 0.67
O00370 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.23■□□□□ 0.67
O00370 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
O00370 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
O00370 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
O00370 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
O00370 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
O00370 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.23■□□□□ 0.67
O00370 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.23■□□□□ 0.67
O00370 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.23■□□□□ 0.67
O00370 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 LINC00602-201ENST00000629776 2065 ntBASIC19.23■□□□□ 0.67
O00370 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
O00370 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.23■□□□□ 0.67
O00370 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
O00370 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
O00370 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
O00370 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.22■□□□□ 0.67
O00370 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.22■□□□□ 0.67
O00370 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.22■□□□□ 0.67
O00370 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.22■□□□□ 0.67
O00370 AC005332.3-201ENST00000589904 676 ntBASIC19.22■□□□□ 0.67
O00370 GPR32P1-201ENST00000601788 811 ntBASIC19.22■□□□□ 0.67
O00370 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.22■□□□□ 0.67
O00370 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
O00370 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.22■□□□□ 0.67
O00370 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.22■□□□□ 0.67
O00370 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
O00370 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.22■□□□□ 0.67
O00370 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
O00370 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
O00370 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.21■□□□□ 0.67
O00370 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
O00370 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 ARMC10P1-201ENST00000313754 855 ntBASIC19.21■□□□□ 0.67
O00370 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.21■□□□□ 0.67
O00370 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
O00370 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.21■□□□□ 0.67
O00370 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.21■□□□□ 0.67
O00370 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.21■□□□□ 0.67
O00370 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.21■□□□□ 0.67
O00370 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.21■□□□□ 0.67
O00370 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 Z83836.1-201ENST00000624605 1642 ntBASIC19.21■□□□□ 0.67
O00370 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.21■□□□□ 0.67
O00370 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.21■□□□□ 0.67
O00370 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
O00370 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.21■□□□□ 0.67
O00370 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
O00370 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
O00370 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms