Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC188H7C350 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC188H7C350 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC188H7C350 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC188H7C350 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 AC100803.2-201ENST00000562459 1963 ntBASIC18.76■□□□□ 0.59
CCDC188H7C350 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC188H7C350 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC188H7C350 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.76■□□□□ 0.59
CCDC188H7C350 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC188H7C350 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 WWOX-216ENST00000569818 525 ntBASIC18.76■□□□□ 0.59
CCDC188H7C350 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC188H7C350 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC188H7C350 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC188H7C350 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC188H7C350 AC022898.2-201ENST00000616822 1312 ntBASIC18.75■□□□□ 0.59
CCDC188H7C350 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 HLA-J-201ENST00000462773 1622 ntBASIC18.75■□□□□ 0.59
CCDC188H7C350 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
CCDC188H7C350 RPPH1-201ENST00000516869 333 ntBASIC18.75■□□□□ 0.59
CCDC188H7C350 AC090192.1-201ENST00000517740 490 ntBASIC18.75■□□□□ 0.59
CCDC188H7C350 AC104390.1-201ENST00000555663 520 ntBASIC18.75■□□□□ 0.59
CCDC188H7C350 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC188H7C350 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC188H7C350 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 AC132938.6-201ENST00000623828 1655 ntBASIC18.75■□□□□ 0.59
CCDC188H7C350 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC188H7C350 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC188H7C350 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC188H7C350 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC188H7C350 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC188H7C350 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC188H7C350 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC188H7C350 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC188H7C350 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC188H7C350 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC188H7C350 MIR935-201ENST00000401179 91 ntBASIC18.74■□□□□ 0.59
CCDC188H7C350 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 AC128676.1-201ENST00000454392 318 ntBASIC18.74■□□□□ 0.59
CCDC188H7C350 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC188H7C350 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC188H7C350 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC188H7C350 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC188H7C350 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC188H7C350 CD177P1-201ENST00000606252 935 ntBASIC18.74■□□□□ 0.59
CCDC188H7C350 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC188H7C350 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC188H7C350 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC188H7C350 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC188H7C350 AL135905.2-201ENST00000584934 1404 ntBASIC18.74■□□□□ 0.59
CCDC188H7C350 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms