Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DNMT3AQ9Y6K1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNMT3AQ9Y6K1 AC009113.1-201ENST00000570267 2443 ntBASIC17.68■□□□□ 0.42
DNMT3AQ9Y6K1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.68■□□□□ 0.42
DNMT3AQ9Y6K1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DNMT3AQ9Y6K1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
DNMT3AQ9Y6K1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNMT3AQ9Y6K1 AC233702.3-201ENST00000578656 1387 ntBASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 AC112698.1-201ENST00000510299 916 ntBASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNMT3AQ9Y6K1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 BICD1-207ENST00000551848 1962 ntBASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 TOB2P1-201ENST00000469761 992 ntBASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 AC012615.1-201ENST00000565797 1299 ntBASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
DNMT3AQ9Y6K1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNMT3AQ9Y6K1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms