Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 AC134684.3-201ENST00000641758 218 ntBASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 MCCD1P2-201ENST00000423228 335 ntBASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 RPS8P6-201ENST00000426177 609 ntBASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.65■□□□□ 0.74
SCN10AQ9Y5Y9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 KRT18P2-201ENST00000447938 1258 ntBASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 AC112482.1-201ENST00000492080 688 ntBASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 AC064836.3-201ENST00000607928 673 ntBASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 AC073592.5-201ENST00000624854 528 ntBASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN10AQ9Y5Y9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 AC073592.3-201ENST00000625118 1834 ntBASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 CROCCP3-202ENST00000420820 1947 ntBASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 AP006288.1-201ENST00000446065 395 ntBASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN10AQ9Y5Y9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 SIRPAP1-201ENST00000448467 1770 ntBASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 AC006504.4-201ENST00000592118 1568 ntBASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 MTDHP5-201ENST00000598980 586 ntBASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SCN10AQ9Y5Y9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms