Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 WIZP1-201ENST00000531444 2299 ntBASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 AC091607.1-201ENST00000490318 1060 ntBASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 KRT18P41-201ENST00000518924 1277 ntBASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 AL671883.3-201ENST00000603274 991 ntBASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 TP73-AS1-207ENST00000624167 988 ntBASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 AC018470.1-201ENST00000624790 3129 ntBASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA9Q9Y5G4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 KRT18P67-201ENST00000432816 1264 ntBASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 FAM197Y8-203ENST00000450145 560 ntBASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 RNA5SP419-201ENST00000515908 135 ntBASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 AL591684.3-201ENST00000605187 298 ntBASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 KRT8P50-201ENST00000562022 1438 ntBASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA9Q9Y5G4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 AL133373.2-201ENST00000623187 2828 ntBASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA9Q9Y5G4 AF186996.4-201ENST00000467186 377 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms