Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 TSPY14P-201ENST00000303979 915 ntBASIC21.22■□□□□ 0.99
SMC3Q9UQE7 INGX-201ENST00000359239 846 ntBASIC21.22■□□□□ 0.99
SMC3Q9UQE7 AL355075.4-201ENST00000554988 638 ntBASIC21.22■□□□□ 0.99
SMC3Q9UQE7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMC3Q9UQE7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 SNORA78-201ENST00000459373 127 ntBASIC21.21■□□□□ 0.99
SMC3Q9UQE7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMC3Q9UQE7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 EGLN1P1-201ENST00000531623 762 ntBASIC21.2■□□□□ 0.98
SMC3Q9UQE7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 KRT17P2-201ENST00000300992 1314 ntBASIC21.2■□□□□ 0.98
SMC3Q9UQE7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 AC139713.2-201ENST00000641328 2723 ntBASIC21.2■□□□□ 0.98
SMC3Q9UQE7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
SMC3Q9UQE7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 AL645608.8-201ENST00000606034 2086 ntBASIC21.19■□□□□ 0.98
SMC3Q9UQE7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 SEC1P-202ENST00000473944 940 ntBASIC21.19■□□□□ 0.98
SMC3Q9UQE7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 AC024243.1-201ENST00000609234 778 ntBASIC21.19■□□□□ 0.98
SMC3Q9UQE7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
SMC3Q9UQE7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms