Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 KRT8P9-201ENST00000558927 1449 ntBASIC16.34■□□□□ 0.21
HINT3Q9NQE9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
HINT3Q9NQE9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.33■□□□□ 0.21
HINT3Q9NQE9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
HINT3Q9NQE9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
HINT3Q9NQE9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.33■□□□□ 0.21
HINT3Q9NQE9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.33■□□□□ 0.21
HINT3Q9NQE9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.33■□□□□ 0.21
HINT3Q9NQE9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.33■□□□□ 0.21
HINT3Q9NQE9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 AC106820.2-201ENST00000563775 3264 ntBASIC16.33■□□□□ 0.2
HINT3Q9NQE9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HINT3Q9NQE9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 KRT18P23-201ENST00000435622 1283 ntBASIC16.32■□□□□ 0.2
HINT3Q9NQE9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HINT3Q9NQE9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 CYP2D8P-201ENST00000433633 1490 ntBASIC16.31■□□□□ 0.2
HINT3Q9NQE9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 LINC01568-207ENST00000641790 1380 ntBASIC16.31■□□□□ 0.2
HINT3Q9NQE9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 AC010947.1-201ENST00000623454 693 ntBASIC16.31■□□□□ 0.2
HINT3Q9NQE9 AC097493.4-201ENST00000641197 219 ntBASIC16.31■□□□□ 0.2
HINT3Q9NQE9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HINT3Q9NQE9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 KRT8P7-201ENST00000533003 1432 ntBASIC16.3■□□□□ 0.2
HINT3Q9NQE9 AC099398.1-201ENST00000567919 2776 ntBASIC16.3■□□□□ 0.2
HINT3Q9NQE9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms