Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 LINC00265-3P-201ENST00000447588 903 ntBASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 TOB2P1-201ENST00000469761 992 ntBASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 CLEC4GP1-201ENST00000596555 870 ntBASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MKKSQ9NPJ1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MKKSQ9NPJ1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MKKSQ9NPJ1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.08■□□□□ 0.33
MKKSQ9NPJ1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.08■□□□□ 0.33
MKKSQ9NPJ1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MKKSQ9NPJ1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
MKKSQ9NPJ1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MKKSQ9NPJ1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
MKKSQ9NPJ1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.08■□□□□ 0.33
MKKSQ9NPJ1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.08■□□□□ 0.33
MKKSQ9NPJ1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.08■□□□□ 0.32
MKKSQ9NPJ1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 AP000867.3-201ENST00000524675 377 ntBASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 AC012615.1-201ENST00000565797 1299 ntBASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 AC011840.4-201ENST00000578471 627 ntBASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 Z69720.1-201ENST00000601483 472 ntBASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MKKSQ9NPJ1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms