Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSU72Q9NP77 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSU72Q9NP77 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.93■□□□□ 0.46
SSU72Q9NP77 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
SSU72Q9NP77 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.92■□□□□ 0.46
SSU72Q9NP77 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.92■□□□□ 0.46
SSU72Q9NP77 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.92■□□□□ 0.46
SSU72Q9NP77 AC104390.1-201ENST00000555663 520 ntBASIC17.92■□□□□ 0.46
SSU72Q9NP77 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.92■□□□□ 0.46
SSU72Q9NP77 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.92■□□□□ 0.46
SSU72Q9NP77 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.92■□□□□ 0.46
SSU72Q9NP77 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SSU72Q9NP77 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.92■□□□□ 0.46
SSU72Q9NP77 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
SSU72Q9NP77 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.92■□□□□ 0.46
SSU72Q9NP77 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSU72Q9NP77 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 WWOX-216ENST00000569818 525 ntBASIC17.91■□□□□ 0.46
SSU72Q9NP77 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSU72Q9NP77 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
SSU72Q9NP77 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SSU72Q9NP77 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSU72Q9NP77 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.89■□□□□ 0.46
SSU72Q9NP77 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
SSU72Q9NP77 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SSU72Q9NP77 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.89■□□□□ 0.46
SSU72Q9NP77 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SSU72Q9NP77 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSU72Q9NP77 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSU72Q9NP77 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSU72Q9NP77 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.89■□□□□ 0.45
SSU72Q9NP77 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.89■□□□□ 0.45
SSU72Q9NP77 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SSU72Q9NP77 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SSU72Q9NP77 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SSU72Q9NP77 SLC25A1P4-201ENST00000567977 778 ntBASIC17.89■□□□□ 0.45
SSU72Q9NP77 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms