Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 GPALPP1-207ENST00000611650 899 ntBASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM9SF3Q9HD45 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 FAM197Y8-203ENST00000450145 560 ntBASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 AC113404.2-201ENST00000507884 177 ntBASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 AP001005.1-201ENST00000571755 1248 ntBASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 AC008687.5-201ENST00000593746 558 ntBASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 AC114341.1-201ENST00000618070 349 ntBASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 AC083906.6-201ENST00000641366 219 ntBASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.04■□□□□ 0.48
TM9SF3Q9HD45 AC104581.1-202ENST00000635932 2618 ntBASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 AC009102.3-201ENST00000623118 1491 ntBASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 RNA5SP419-201ENST00000515908 135 ntBASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 AL773604.1-201ENST00000617417 272 ntBASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.03■□□□□ 0.48
TM9SF3Q9HD45 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms