Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AMBRA1Q9C0C7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 MIR3180-5-201ENST00000583743 153 ntBASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
AMBRA1Q9C0C7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 AC036111.1-201ENST00000533973 1582 ntBASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 HTR7P1-202ENST00000624664 4411 ntBASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 AL023806.1-201ENST00000603994 1649 ntBASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 MIR4674-201ENST00000582457 87 ntBASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 AC009102.3-201ENST00000623118 1491 ntBASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms