Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 EP400NL-214ENST00000641289 2402 ntBASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 AC007967.3-201ENST00000434308 558 ntBASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRFN3Q9BTN0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 AC112191.1-201ENST00000523689 701 ntBASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 NCF1C-201ENST00000438382 1427 ntBASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN3Q9BTN0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 AC006116.8-202ENST00000587620 1550 ntBASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 LINC00602-201ENST00000629776 2065 ntBASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.88■□□□□ 0.45
LRFN3Q9BTN0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 AC112698.1-201ENST00000510299 916 ntBASIC17.87■□□□□ 0.45
LRFN3Q9BTN0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms