Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDHD3Q9BSH5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 AL355355.2-201ENST00000442321 338 ntBASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 AL049637.2-201ENST00000641778 930 ntBASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HDHD3Q9BSH5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AL355312.1-201ENST00000407115 2176 ntBASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AC233702.5-201ENST00000584107 538 ntBASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AC026471.5-201ENST00000615068 467 ntBASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AL023803.3-201ENST00000615559 522 ntBASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AC100803.2-201ENST00000562459 1963 ntBASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.25■□□□□ 0.03
HDHD3Q9BSH5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms