Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 RN7SL471P-201ENST00000580476 299 ntBASIC17.61■□□□□ 0.41
EBF4Q9BQW3 MIR3180-5-201ENST00000583743 153 ntBASIC17.61■□□□□ 0.41
EBF4Q9BQW3 AP000692.2-201ENST00000608391 879 ntBASIC17.61■□□□□ 0.41
EBF4Q9BQW3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 MIR4674-201ENST00000582457 87 ntBASIC17.6■□□□□ 0.41
EBF4Q9BQW3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
EBF4Q9BQW3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.59■□□□□ 0.41
EBF4Q9BQW3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 AL024508.2-201ENST00000607749 1894 ntBASIC17.59■□□□□ 0.41
EBF4Q9BQW3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 AL355802.2-201ENST00000402069 882 ntBASIC17.59■□□□□ 0.41
EBF4Q9BQW3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.59■□□□□ 0.41
EBF4Q9BQW3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EBF4Q9BQW3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
EBF4Q9BQW3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EBF4Q9BQW3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EBF4Q9BQW3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EBF4Q9BQW3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
EBF4Q9BQW3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
EBF4Q9BQW3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.58■□□□□ 0.41
EBF4Q9BQW3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EBF4Q9BQW3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 AC096733.2-201ENST00000609937 1394 ntBASIC17.58■□□□□ 0.4
EBF4Q9BQW3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 AL353807.1-201ENST00000427475 662 ntBASIC17.58■□□□□ 0.4
EBF4Q9BQW3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EBF4Q9BQW3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EBF4Q9BQW3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms