Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.59■□□□□ 0.41
PKP4Q99569 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.59■□□□□ 0.41
PKP4Q99569 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.59■□□□□ 0.41
PKP4Q99569 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.59■□□□□ 0.41
PKP4Q99569 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.59■□□□□ 0.41
PKP4Q99569 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP4Q99569 RNF126P1-202ENST00000569893 925 ntBASIC17.59■□□□□ 0.41
PKP4Q99569 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP4Q99569 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.59■□□□□ 0.41
PKP4Q99569 AC005332.3-201ENST00000589904 676 ntBASIC17.59■□□□□ 0.41
PKP4Q99569 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.59■□□□□ 0.41
PKP4Q99569 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PKP4Q99569 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PKP4Q99569 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PKP4Q99569 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.59■□□□□ 0.41
PKP4Q99569 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PKP4Q99569 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PKP4Q99569 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.58■□□□□ 0.41
PKP4Q99569 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PKP4Q99569 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PKP4Q99569 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PKP4Q99569 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PKP4Q99569 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PKP4Q99569 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.58■□□□□ 0.4
PKP4Q99569 AL645929.1-201ENST00000420084 975 ntBASIC17.58■□□□□ 0.4
PKP4Q99569 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.58■□□□□ 0.4
PKP4Q99569 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PKP4Q99569 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.58■□□□□ 0.4
PKP4Q99569 AL136038.3-201ENST00000561909 1096 ntBASIC17.58■□□□□ 0.4
PKP4Q99569 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.58■□□□□ 0.4
PKP4Q99569 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.58■□□□□ 0.4
PKP4Q99569 AC087388.1-201ENST00000571370 1112 ntBASIC17.58■□□□□ 0.4
PKP4Q99569 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
PKP4Q99569 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.58■□□□□ 0.4
PKP4Q99569 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.58■□□□□ 0.4
PKP4Q99569 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.58■□□□□ 0.4
PKP4Q99569 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PKP4Q99569 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PKP4Q99569 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PKP4Q99569 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.58■□□□□ 0.4
PKP4Q99569 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PKP4Q99569 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.58■□□□□ 0.4
PKP4Q99569 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
PKP4Q99569 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
PKP4Q99569 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
PKP4Q99569 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.57■□□□□ 0.4
PKP4Q99569 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.57■□□□□ 0.4
PKP4Q99569 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
PKP4Q99569 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.57■□□□□ 0.4
PKP4Q99569 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PKP4Q99569 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.57■□□□□ 0.4
PKP4Q99569 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PKP4Q99569 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.57■□□□□ 0.4
PKP4Q99569 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.57■□□□□ 0.4
PKP4Q99569 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.57■□□□□ 0.4
PKP4Q99569 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 DUTP2-201ENST00000519164 463 ntBASIC17.57■□□□□ 0.4
PKP4Q99569 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.57■□□□□ 0.4
PKP4Q99569 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.57■□□□□ 0.4
PKP4Q99569 GPR32P1-201ENST00000601788 811 ntBASIC17.57■□□□□ 0.4
PKP4Q99569 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.57■□□□□ 0.4
PKP4Q99569 AL121956.5-201ENST00000625261 221 ntBASIC17.57■□□□□ 0.4
PKP4Q99569 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PKP4Q99569 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.57■□□□□ 0.4
PKP4Q99569 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PKP4Q99569 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.57■□□□□ 0.4
PKP4Q99569 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.56■□□□□ 0.4
PKP4Q99569 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PKP4Q99569 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.56■□□□□ 0.4
PKP4Q99569 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PKP4Q99569 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms