Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 HOXB1-202ENST00000577092 1414 ntBASIC16.47■□□□□ 0.23
SNX18Q96RF0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 UNC93B2-201ENST00000285383 730 ntBASIC16.47■□□□□ 0.23
SNX18Q96RF0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 RBM17P1-201ENST00000453646 1190 ntBASIC16.47■□□□□ 0.23
SNX18Q96RF0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 AP000525.1-201ENST00000608286 694 ntBASIC16.47■□□□□ 0.23
SNX18Q96RF0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 AL645608.8-201ENST00000606034 2086 ntBASIC16.47■□□□□ 0.23
SNX18Q96RF0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SNX18Q96RF0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX18Q96RF0 CICP6-201ENST00000457191 2729 ntBASIC16.47■□□□□ 0.23
SNX18Q96RF0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 CRYGFP-201ENST00000418459 633 ntBASIC16.46■□□□□ 0.23
SNX18Q96RF0 SLC25A1P2-201ENST00000430693 912 ntBASIC16.46■□□□□ 0.23
SNX18Q96RF0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 AC010331.1-201ENST00000611423 582 ntBASIC16.46■□□□□ 0.23
SNX18Q96RF0 AC097493.4-201ENST00000641197 219 ntBASIC16.46■□□□□ 0.23
SNX18Q96RF0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX18Q96RF0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX18Q96RF0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SNX18Q96RF0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SNX18Q96RF0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.46■□□□□ 0.22
SNX18Q96RF0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
SNX18Q96RF0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SNX18Q96RF0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SNX18Q96RF0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SNX18Q96RF0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX18Q96RF0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX18Q96RF0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX18Q96RF0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX18Q96RF0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX18Q96RF0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SNX18Q96RF0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX18Q96RF0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX18Q96RF0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX18Q96RF0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX18Q96RF0 AC134043.2-201ENST00000624206 2238 ntBASIC16.45■□□□□ 0.22
SNX18Q96RF0 MIR1238-201ENST00000408483 83 ntBASIC16.45■□□□□ 0.22
SNX18Q96RF0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.45■□□□□ 0.22
SNX18Q96RF0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX18Q96RF0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.45■□□□□ 0.22
SNX18Q96RF0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX18Q96RF0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SNX18Q96RF0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms