Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCD1Q96GM5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCD1Q96GM5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 AL020996.1-203ENST00000536896 2307 ntBASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 FOSL1P1-201ENST00000511041 816 ntBASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 AC138894.3-201ENST00000603787 634 ntBASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCD1Q96GM5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 AL450487.1-201ENST00000426799 995 ntBASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 AL121772.3-201ENST00000610840 674 ntBASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCD1Q96GM5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 BNIP3P18-201ENST00000593976 575 ntBASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 AL138831.2-201ENST00000606564 490 ntBASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SMARCD1Q96GM5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCD1Q96GM5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms