Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 PMS2P1-201ENST00000431037 1228 ntBASIC18.06■□□□□ 0.48
SIPA1Q96FS4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 GPALPP1-207ENST00000611650 899 ntBASIC18.06■□□□□ 0.48
SIPA1Q96FS4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIPA1Q96FS4 AP005117.1-201ENST00000584346 1413 ntBASIC18.06■□□□□ 0.48
SIPA1Q96FS4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 RPS2P28-201ENST00000314255 741 ntBASIC18.05■□□□□ 0.48
SIPA1Q96FS4 ABCD1P5-201ENST00000445663 754 ntBASIC18.05■□□□□ 0.48
SIPA1Q96FS4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 AL671883.3-201ENST00000603274 991 ntBASIC18.05■□□□□ 0.48
SIPA1Q96FS4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SIPA1Q96FS4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 AL020996.1-203ENST00000536896 2307 ntBASIC18.04■□□□□ 0.48
SIPA1Q96FS4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 MIR574-201ENST00000385209 96 ntBASIC18.04■□□□□ 0.48
SIPA1Q96FS4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 SLC25A1P1-201ENST00000528351 927 ntBASIC18.04■□□□□ 0.48
SIPA1Q96FS4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 AC139887.3-201ENST00000568585 713 ntBASIC18.04■□□□□ 0.48
SIPA1Q96FS4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 FAM215A-202ENST00000632077 792 ntBASIC18.04■□□□□ 0.48
SIPA1Q96FS4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms