Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 AC125634.1-201ENST00000438758 1403 ntBASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 KRT8P47-201ENST00000604727 1398 ntBASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
ECHDC3Q96DC8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 AC012313.10-201ENST00000623509 926 ntBASIC18.02■□□□□ 0.48
ECHDC3Q96DC8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ECHDC3Q96DC8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
ECHDC3Q96DC8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.02■□□□□ 0.47
ECHDC3Q96DC8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ECHDC3Q96DC8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ECHDC3Q96DC8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ECHDC3Q96DC8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ECHDC3Q96DC8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.02■□□□□ 0.47
ECHDC3Q96DC8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ECHDC3Q96DC8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 BNIP3P18-201ENST00000593976 575 ntBASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 AP000997.3-201ENST00000623333 2250 ntBASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ECHDC3Q96DC8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms