Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 AC024563.2-201ENST00000603282 481 ntBASIC16.92■□□□□ 0.3
NUP43Q8NFH3 AL136038.4-201ENST00000603606 1261 ntBASIC16.92■□□□□ 0.3
NUP43Q8NFH3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 AC079602.3-201ENST00000623931 403 ntBASIC16.92■□□□□ 0.3
NUP43Q8NFH3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 PCDHB18P-201ENST00000524813 2368 ntBASIC16.92■□□□□ 0.3
NUP43Q8NFH3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 AC132938.6-201ENST00000623828 1655 ntBASIC16.91■□□□□ 0.3
NUP43Q8NFH3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 SPDYE15P-201ENST00000424157 909 ntBASIC16.91■□□□□ 0.3
NUP43Q8NFH3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.91■□□□□ 0.3
NUP43Q8NFH3 GNAS-203ENST00000306120 1878 ntBASIC16.9■□□□□ 0.3
NUP43Q8NFH3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 STARP1-201ENST00000397973 869 ntBASIC16.9■□□□□ 0.3
NUP43Q8NFH3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 DUTP2-201ENST00000519164 463 ntBASIC16.9■□□□□ 0.3
NUP43Q8NFH3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 KRT18P55-202ENST00000578578 1546 ntBASIC16.9■□□□□ 0.3
NUP43Q8NFH3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP43Q8NFH3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NUP43Q8NFH3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.89■□□□□ 0.3
NUP43Q8NFH3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 AC026471.1-201ENST00000564629 3026 ntBASIC16.89■□□□□ 0.29
NUP43Q8NFH3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms