Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 AC138028.4-201ENST00000564984 1845 ntBASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 Z69720.1-201ENST00000601483 472 ntBASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRAM1L1Q8N609 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 AP000997.3-201ENST00000623333 2250 ntBASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAM1L1Q8N609 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAM1L1Q8N609 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms