Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC26.79■■□□□ 1.88
CCDC141Q6ZP82 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC26.79■■□□□ 1.88
CCDC141Q6ZP82 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC141Q6ZP82 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 KLF4P1-201ENST00000412782 1185 ntBASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 AC112482.1-201ENST00000492080 688 ntBASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 AC004706.3-202ENST00000621574 984 ntBASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 AC134684.3-201ENST00000641758 218 ntBASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 AC073592.3-201ENST00000625118 1834 ntBASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC141Q6ZP82 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 AC132938.5-201ENST00000624980 1813 ntBASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 AC023274.1-201ENST00000418278 595 ntBASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 PON3-205ENST00000451904 1053 ntTSL 3 BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 AC108073.2-201ENST00000464002 357 ntBASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
CCDC141Q6ZP82 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.88
CCDC141Q6ZP82 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 AC103564.2-201ENST00000432853 1299 ntBASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 CIPC-205ENST00000555437 566 ntTSL 3 BASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 AC019129.2-201ENST00000609837 1235 ntBASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 MED29-202ENST00000594368 1471 ntTSL 2 BASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 AC002310.6-201ENST00000624451 1377 ntBASIC26.76■■□□□ 1.87
CCDC141Q6ZP82 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 ARTN-206ENST00000472435 402 ntTSL 3 BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 NCF1C-201ENST00000438382 1427 ntBASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC26.75■■□□□ 1.87
CCDC141Q6ZP82 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 COX5BP2-201ENST00000392354 334 ntBASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 SP100-208ENST00000427101 1922 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms