Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 KRT8P47-201ENST00000604727 1398 ntBASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 LINC01521-201ENST00000504184 1943 ntBASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRPF38BQ5VTL8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 AC079416.2-201ENST00000625035 1193 ntBASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 SDHAP1-207ENST00000440850 2000 ntBASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF38BQ5VTL8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 Z98882.1-201ENST00000622160 2253 ntBASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF38BQ5VTL8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 AC079776.1-201ENST00000401540 1152 ntBASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 AC112191.1-201ENST00000523689 701 ntBASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 AC026120.1-201ENST00000611536 926 ntBASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 AL033527.4-201ENST00000641026 673 ntBASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PRPF38BQ5VTL8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 AC007225.1-201ENST00000566331 1836 ntBASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 FAM86MP-201ENST00000340703 885 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms