Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 AP000974.1-201ENST00000623909 2387 ntBASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 AP005117.1-201ENST00000584346 1413 ntBASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 AF228730.7-201ENST00000641842 219 ntBASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 AC243591.1-201ENST00000452967 1364 ntBASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNFT1Q5M7Z0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 ABCD1P5-201ENST00000445663 754 ntBASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNFT1Q5M7Z0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNFT1Q5M7Z0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.21■□□□□ 0.18
RNFT1Q5M7Z0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RNFT1Q5M7Z0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 SART3-203ENST00000546611 1184 ntBASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 MIR7706-201ENST00000613747 67 ntBASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.2■□□□□ 0.18
RNFT1Q5M7Z0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 AC073592.3-201ENST00000625118 1834 ntBASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RNFT1Q5M7Z0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms