Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 SLC25A1P2-201ENST00000430693 912 ntBASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 AP001412.1-201ENST00000608405 714 ntBASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 AC112497.1-201ENST00000624824 639 ntBASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 AL355355.2-201ENST00000442321 338 ntBASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 AC233702.5-201ENST00000584107 538 ntBASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 AC132938.6-201ENST00000623828 1655 ntBASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RUNDC3AQ59EK9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 KRT18P29-201ENST00000397031 1267 ntBASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 AC012618.2-201ENST00000428058 849 ntBASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 FAM201B-201ENST00000458407 597 ntBASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 AC142381.4-202ENST00000563973 229 ntBASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 AL049637.2-201ENST00000641778 930 ntBASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 AC100803.2-201ENST00000562459 1963 ntBASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 AL138688.1-201ENST00000624851 1594 ntBASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.05■□□□□ 0.32
RUNDC3AQ59EK9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 AC133963.1-201ENST00000504166 1679 ntBASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RUNDC3AQ59EK9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms