Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.99■□□□□ 0.95
IRX3P78415 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 MTCL1P1-201ENST00000446207 792 ntBASIC20.99■□□□□ 0.95
IRX3P78415 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.99■□□□□ 0.95
IRX3P78415 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.99■□□□□ 0.95
IRX3P78415 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.99■□□□□ 0.95
IRX3P78415 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 AP001269.4-201ENST00000609611 512 ntBASIC20.99■□□□□ 0.95
IRX3P78415 FAM215A-202ENST00000632077 792 ntBASIC20.99■□□□□ 0.95
IRX3P78415 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
IRX3P78415 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.99■□□□□ 0.95
IRX3P78415 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.99■□□□□ 0.95
IRX3P78415 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.99■□□□□ 0.95
IRX3P78415 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.99■□□□□ 0.95
IRX3P78415 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX3P78415 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.99■□□□□ 0.95
IRX3P78415 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 AFG3L1P-217ENST00000557444 2447 ntBASIC20.98■□□□□ 0.95
IRX3P78415 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
IRX3P78415 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
IRX3P78415 RPL13AP23-201ENST00000480739 586 ntBASIC20.98■□□□□ 0.95
IRX3P78415 AC092865.5-201ENST00000545435 363 ntBASIC20.98■□□□□ 0.95
IRX3P78415 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.98■□□□□ 0.95
IRX3P78415 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
IRX3P78415 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
IRX3P78415 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX3P78415 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.97■□□□□ 0.95
IRX3P78415 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
IRX3P78415 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.97■□□□□ 0.95
IRX3P78415 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
IRX3P78415 AL049812.1-201ENST00000432563 2267 ntBASIC20.97■□□□□ 0.95
IRX3P78415 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.97■□□□□ 0.95
IRX3P78415 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
IRX3P78415 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.97■□□□□ 0.95
IRX3P78415 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
IRX3P78415 RPS2P28-201ENST00000314255 741 ntBASIC20.97■□□□□ 0.95
IRX3P78415 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
IRX3P78415 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.97■□□□□ 0.95
IRX3P78415 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.97■□□□□ 0.95
IRX3P78415 TERC-201ENST00000602385 541 ntBASIC20.97■□□□□ 0.95
IRX3P78415 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.97■□□□□ 0.95
IRX3P78415 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.97■□□□□ 0.95
IRX3P78415 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
IRX3P78415 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
IRX3P78415 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IRX3P78415 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IRX3P78415 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
IRX3P78415 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IRX3P78415 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IRX3P78415 INTS4P1-201ENST00000438455 1935 ntBASIC20.96■□□□□ 0.95
IRX3P78415 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
IRX3P78415 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IRX3P78415 AC005332.8-201ENST00000622750 2735 ntBASIC20.96■□□□□ 0.95
IRX3P78415 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.96■□□□□ 0.95
IRX3P78415 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
IRX3P78415 MIR940-201ENST00000401276 94 ntBASIC20.96■□□□□ 0.95
IRX3P78415 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.96■□□□□ 0.95
IRX3P78415 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.96■□□□□ 0.95
IRX3P78415 AL138831.2-201ENST00000606564 490 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms