Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
EPHA4P54764 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
EPHA4P54764 RCN1P2-201ENST00000398357 915 ntBASIC17.36■□□□□ 0.37
EPHA4P54764 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.36■□□□□ 0.37
EPHA4P54764 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.36■□□□□ 0.37
EPHA4P54764 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.36■□□□□ 0.37
EPHA4P54764 AC011467.2-201ENST00000598425 242 ntBASIC17.36■□□□□ 0.37
EPHA4P54764 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHA4P54764 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.36■□□□□ 0.37
EPHA4P54764 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHA4P54764 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
EPHA4P54764 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
EPHA4P54764 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 AC009078.2-202ENST00000463353 338 ntBASIC17.35■□□□□ 0.37
EPHA4P54764 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.35■□□□□ 0.37
EPHA4P54764 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.35■□□□□ 0.37
EPHA4P54764 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.35■□□□□ 0.37
EPHA4P54764 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHA4P54764 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.35■□□□□ 0.37
EPHA4P54764 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.35■□□□□ 0.37
EPHA4P54764 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHA4P54764 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.35■□□□□ 0.37
EPHA4P54764 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.35■□□□□ 0.37
EPHA4P54764 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EPHA4P54764 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
EPHA4P54764 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
EPHA4P54764 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHA4P54764 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EPHA4P54764 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHA4P54764 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHA4P54764 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHA4P54764 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHA4P54764 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHA4P54764 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.34■□□□□ 0.37
EPHA4P54764 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.34■□□□□ 0.37
EPHA4P54764 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHA4P54764 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.34■□□□□ 0.37
EPHA4P54764 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 AF238378.1-201ENST00000526806 358 ntBASIC17.34■□□□□ 0.37
EPHA4P54764 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.34■□□□□ 0.37
EPHA4P54764 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHA4P54764 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHA4P54764 AC064862.7-201ENST00000604520 867 ntBASIC17.34■□□□□ 0.37
EPHA4P54764 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.34■□□□□ 0.37
EPHA4P54764 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.34■□□□□ 0.37
EPHA4P54764 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHA4P54764 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHA4P54764 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EPHA4P54764 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EPHA4P54764 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
EPHA4P54764 INTS4P1-201ENST00000438455 1935 ntBASIC17.33■□□□□ 0.37
EPHA4P54764 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EPHA4P54764 AC132938.6-201ENST00000623828 1655 ntBASIC17.33■□□□□ 0.37
EPHA4P54764 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EPHA4P54764 AC093010.1-201ENST00000473625 1624 ntBASIC17.33■□□□□ 0.37
EPHA4P54764 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.33■□□□□ 0.37
EPHA4P54764 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
EPHA4P54764 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.33■□□□□ 0.37
EPHA4P54764 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
EPHA4P54764 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EPHA4P54764 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA4P54764 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
EPHA4P54764 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
EPHA4P54764 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.33■□□□□ 0.36
EPHA4P54764 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms