Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.21■□□□□ 0.51
XPAP23025 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
XPAP23025 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
XPAP23025 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.21■□□□□ 0.51
XPAP23025 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
XPAP23025 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.21■□□□□ 0.51
XPAP23025 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 AC011840.4-201ENST00000578471 627 ntBASIC18.21■□□□□ 0.51
XPAP23025 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.21■□□□□ 0.51
XPAP23025 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.21■□□□□ 0.51
XPAP23025 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.21■□□□□ 0.51
XPAP23025 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
XPAP23025 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.21■□□□□ 0.51
XPAP23025 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
XPAP23025 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
XPAP23025 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
XPAP23025 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
XPAP23025 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
XPAP23025 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.2■□□□□ 0.5
XPAP23025 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.2■□□□□ 0.5
XPAP23025 DRAXINP1-201ENST00000437611 948 ntBASIC18.2■□□□□ 0.5
XPAP23025 TOB2P1-201ENST00000469761 992 ntBASIC18.2■□□□□ 0.5
XPAP23025 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 PRELID1P1-202ENST00000567272 903 ntBASIC18.2■□□□□ 0.5
XPAP23025 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.2■□□□□ 0.5
XPAP23025 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.2■□□□□ 0.5
XPAP23025 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
XPAP23025 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
XPAP23025 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
XPAP23025 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XPAP23025 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
XPAP23025 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
XPAP23025 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
XPAP23025 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
XPAP23025 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
XPAP23025 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
XPAP23025 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XPAP23025 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.19■□□□□ 0.5
XPAP23025 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
XPAP23025 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
XPAP23025 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
XPAP23025 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.19■□□□□ 0.5
XPAP23025 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.19■□□□□ 0.5
XPAP23025 TPSP2-201ENST00000561760 610 ntBASIC18.19■□□□□ 0.5
XPAP23025 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
XPAP23025 MIR3180-1-201ENST00000580374 94 ntBASIC18.19■□□□□ 0.5
XPAP23025 MIR3180-3-201ENST00000584616 94 ntBASIC18.19■□□□□ 0.5
XPAP23025 Z69720.1-201ENST00000601483 472 ntBASIC18.19■□□□□ 0.5
XPAP23025 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.19■□□□□ 0.5
XPAP23025 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
XPAP23025 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XPAP23025 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
XPAP23025 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XPAP23025 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.19■□□□□ 0.5
XPAP23025 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.19■□□□□ 0.5
XPAP23025 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.19■□□□□ 0.5
XPAP23025 AL138781.2-201ENST00000617896 1843 ntBASIC18.19■□□□□ 0.5
XPAP23025 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XPAP23025 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
XPAP23025 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms