Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARAP10276 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RARAP10276 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.97■□□□□ 0.63
RARAP10276 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RARAP10276 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.97■□□□□ 0.63
RARAP10276 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RARAP10276 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARAP10276 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RARAP10276 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.97■□□□□ 0.63
RARAP10276 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARAP10276 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.97■□□□□ 0.63
RARAP10276 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARAP10276 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.96■□□□□ 0.63
RARAP10276 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
RARAP10276 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.96■□□□□ 0.63
RARAP10276 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.96■□□□□ 0.63
RARAP10276 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.96■□□□□ 0.63
RARAP10276 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.96■□□□□ 0.63
RARAP10276 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RARAP10276 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RARAP10276 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 LIN28AP1-201ENST00000429574 405 ntBASIC18.96■□□□□ 0.63
RARAP10276 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.96■□□□□ 0.63
RARAP10276 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.96■□□□□ 0.63
RARAP10276 AC005363.2-201ENST00000618631 242 ntBASIC18.96■□□□□ 0.63
RARAP10276 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.96■□□□□ 0.63
RARAP10276 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RARAP10276 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.96■□□□□ 0.63
RARAP10276 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.96■□□□□ 0.63
RARAP10276 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RARAP10276 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.95■□□□□ 0.62
RARAP10276 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.95■□□□□ 0.62
RARAP10276 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RARAP10276 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.95■□□□□ 0.62
RARAP10276 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.95■□□□□ 0.62
RARAP10276 AC113347.1-201ENST00000413321 391 ntBASIC18.95■□□□□ 0.62
RARAP10276 ATP5G1P1-201ENST00000448724 379 ntBASIC18.95■□□□□ 0.62
RARAP10276 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RARAP10276 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.95■□□□□ 0.62
RARAP10276 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.95■□□□□ 0.62
RARAP10276 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.95■□□□□ 0.62
RARAP10276 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RARAP10276 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RARAP10276 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RARAP10276 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
RARAP10276 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 AL645608.8-201ENST00000606034 2086 ntBASIC18.95■□□□□ 0.62
RARAP10276 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RARAP10276 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.95■□□□□ 0.62
RARAP10276 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
RARAP10276 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.95■□□□□ 0.62
RARAP10276 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RARAP10276 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RARAP10276 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RARAP10276 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.94■□□□□ 0.62
RARAP10276 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 AC073508.3-201ENST00000619697 1419 ntBASIC18.94■□□□□ 0.62
RARAP10276 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 TERF1P1-201ENST00000311003 1181 ntBASIC18.94■□□□□ 0.62
RARAP10276 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 AC211429.1-201ENST00000415277 523 ntBASIC18.94■□□□□ 0.62
RARAP10276 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.94■□□□□ 0.62
RARAP10276 AL137013.1-201ENST00000432946 1228 ntBASIC18.94■□□□□ 0.62
RARAP10276 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms