Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DOAP06340 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 BCL2-203ENST00000589955 5011 ntBASIC21.23■□□□□ 0.99
HLA-DOAP06340 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DOAP06340 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DOAP06340 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DOAP06340 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DOAP06340 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DOAP06340 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DOAP06340 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.23■□□□□ 0.99
HLA-DOAP06340 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DOAP06340 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DOAP06340 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DOAP06340 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DOAP06340 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DOAP06340 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DOAP06340 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DOAP06340 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 AL031284.1-201ENST00000419297 478 ntBASIC21.22■□□□□ 0.99
HLA-DOAP06340 ABCD1P5-201ENST00000445663 754 ntBASIC21.22■□□□□ 0.99
HLA-DOAP06340 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DOAP06340 AC120114.3-201ENST00000611923 658 ntBASIC21.22■□□□□ 0.99
HLA-DOAP06340 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DOAP06340 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DOAP06340 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DOAP06340 AP000974.1-201ENST00000623909 2387 ntBASIC21.22■□□□□ 0.99
HLA-DOAP06340 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.22■□□□□ 0.99
HLA-DOAP06340 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DOAP06340 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
HLA-DOAP06340 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HLA-DOAP06340 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 FAM220CP-201ENST00000395253 831 ntBASIC21.21■□□□□ 0.99
HLA-DOAP06340 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.21■□□□□ 0.99
HLA-DOAP06340 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 AL590627.1-203ENST00000421194 1026 ntBASIC21.21■□□□□ 0.99
HLA-DOAP06340 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HLA-DOAP06340 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-DOAP06340 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.21■□□□□ 0.99
HLA-DOAP06340 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.21■□□□□ 0.99
HLA-DOAP06340 BX640515.1-201ENST00000617215 977 ntBASIC21.21■□□□□ 0.99
HLA-DOAP06340 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 AC097374.2-201ENST00000618617 1306 ntBASIC21.21■□□□□ 0.99
HLA-DOAP06340 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HLA-DOAP06340 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
HLA-DOAP06340 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DOAP06340 AP005117.1-201ENST00000584346 1413 ntBASIC21.21■□□□□ 0.99
HLA-DOAP06340 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 AC093909.1-201ENST00000504731 1122 ntBASIC21.2■□□□□ 0.98
HLA-DOAP06340 RNA5SP419-201ENST00000515908 135 ntBASIC21.2■□□□□ 0.98
HLA-DOAP06340 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HLA-DOAP06340 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DOAP06340 AC022898.2-201ENST00000616822 1312 ntBASIC21.2■□□□□ 0.98
HLA-DOAP06340 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms